[gmx-users] could not open "temp.top"

David spoel at xray.bmc.uu.se
Fri Jun 11 00:42:17 CEST 2004

On Thu, 2004-06-10 at 22:34, adrian at criba.edu.ar wrote:
> Hi, I am trying to solvate the speptide from the tutorial. First I used pdb2gmx
> and then with editconf i generated a box with distance equal to one.
> I have in one directory an speptide.gro file and an speptide.top file, both of
> them use I as an input for genbox, (genbox -... -p /path/speptide
> it complains as follows:
> "could not open temp.top"
> why genbox tell me that if i used "speptide.top" as an input?

it tries to write a temp file, but you may not write permissions in the
directory you are in.

> thank you in advance
> Adrian Alvarez 
> ----------------------------------------------------------------
> This message was sent using IMP, the Internet Messaging Program.
> _______________________________________________
> gmx-users mailing list
> gmx-users at gromacs.org
> http://www.gromacs.org/mailman/listinfo/gmx-users
> Please don't post (un)subscribe requests to the list. Use the 
> www interface or send it to gmx-users-request at gromacs.org.
David van der Spoel, PhD, Assoc. Prof., Molecular Biophysics group,
Dept. of Cell and Molecular Biology, Uppsala University.
Husargatan 3, Box 596,  	75124 Uppsala, Sweden
phone:	46 18 471 4205		fax: 46 18 511 755
spoel at xray.bmc.uu.se	spoel at gromacs.org   http://xray.bmc.uu.se/~spoel

More information about the gromacs.org_gmx-users mailing list