[gmx-users] Ewald sums too slow?
vcb25 at cam.ac.uk
Tue Jun 15 19:47:44 CEST 2004
For small systems (<100 molecules), I would expect the standard Ewald
sum to be faster than the PME method.
For a system of 64 SPC water molecules in a box of width L=1.2413 nm, I
found however that gromacs-3.2.1 is about 85 times slower when using the
standard Ewald method instead of PME !!
Why are the Ewald sums so slow?
My input parameters were:
ewald_rtol = 1e-05
fourierspacing = 0.12
rlist = rcoulomb = rvdw = 0.62 nm
pme_order = 6
epsilon_surface = 0
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