[gmx-users] g_anaeig output

Berk Hess gmx3 at hotmail.com
Wed Jun 16 14:25:29 CEST 2004


>Dear Berk and others,
>
>I use gromacs version 3.2.1. These are the commands I have used:
>
>g_covar -f full_2.xtc -s full_2.tpr -n -o -v -av -l -ascii -xpm -xpma -nice 
>0
>lsq fit and covariance analysis both on the C-alpha atoms (1032 atoms)
>
>g_anaeig -v -f full_2.xtc -s full_2.tpr -n -eig -comp -rmsf -proj -2d -3d -
>nice 0
>
>Again C-alpha atoms (1032 atoms) were selected. I didn't do anything with
>eigenvec.trr
>
>I hope this helps you (and me ;-)))

Unfortunately it did not help me.
I have never seen an error like this and have not been able to reproduce it.

Could you look directly in the output files to see if you really have only
half of the ouput for vector 1, or if half might be 0 or constant?
And from which time and atom number on is the output missing?

Berk.

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