[gmx-users] How to produce the .top file of the molecule in which the residue has more than one connected points

David van der Spoel spoel at xray.bmc.uu.se
Sun Jun 20 14:28:19 CEST 2004

On Sun, 2004-06-20 at 13:58, Hanming wrote:
> Hi, all, 
> Can I define a residue which has sevral connected points and produce the
> .top file. Or is it right that we can only use pdb2gmx to produce the .top
> file of the linar molecules in Gromacs? 
please be more specific.

> Thanks 
> Ming
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David van der Spoel, PhD, Assoc. Prof., Molecular Biophysics group,
Dept. of Cell and Molecular Biology, Uppsala University.
Husargatan 3, Box 596, 75124 Uppsala, Sweden
phone:  +46 18 471 4205  fax: +46 18 511 755
spoel at xray.bmc.uu.se    spoel at gromacs.org   http://xray.bmc.uu.se/~spoel

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