[gmx-users] missing atom

herbst at fhi-berlin.mpg.de herbst at fhi-berlin.mpg.de
Wed Jun 23 12:55:10 CEST 2004

Hello all,
when I create my .top file from my .pdb file with pdb2gmx, the following
warning appears:

WARNING: atom O1 is missing in residue CYL 75 in the pdb file

But the atom is definitely there, I can see it when I look at the pdb-file
with a graphic program, and it also has the right name. So why does
pdb2gmx not recognize it?


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