[gmx-users] Gromacs force field parametsin NAMD: Syntax error in ATOMS
Sichun Yang
syang at physics.ucsd.edu
Wed Jun 23 20:07:07 CEST 2004
Dear all,
I am new to GROMACS; I am forwarding the email I posted to NAMD-list since
I haven't got any reply yet. Any hing is welcome.
I have been trying to use GROMACS format force field using OPLS-AA in
NAMD.
The error message I have from the output of NAMD:
Info: Using GROMACS format force field!
Info: GROMACS TOPO FILE /parm/my8569.top
Info: GROMACS COOR FILE /parm/my8569.gro
Syntax error in ATOMS
Any suggestion?
The Gromacs format force field is genetated by GROMACS version 3.2.0.
The topology file looks like:
12 opls_235 2 GLY C 4 0.5 12.011 ;
qtot 0.5
13 opls_236 2 GLY O 4 -0.5 15.9994 ;
qtot 0
14 opls_238 3 GLU N 5 -0.5 14.0067 ;
qtot -0.5
Thanks,
-Sichun
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