[gmx-users] Fatal error: Frame contains more atoms than expected

SANTINI sebastien sebastien.santini at igs.cnrs-mrs.fr
Tue May 11 11:52:57 CEST 2004


On Tuesday 11 May 2004 11:33, David van der Spoel wrote:
> On Tue, 2004-05-11 at 11:12, SANTINI sebastien wrote:
> > > > when I check the xtc file I obtain the following message:
> > > >
> > > > Reading frame     180 time 1800.000   Fatal error: Frame contains
> > > > more atoms (806384582) than expected (604)
> > > >
> > > > is there anyone who can say to me where this problem come from ?
> > >
> > > 2Gb file on linux?
> >
> > no, my biggest trr file is around 120 Mb. (and the xtc is around 500 Kb).
>
> Then it seems that the xtc file is corrupt for some reason, NFS problems
> maybe?
>

Our administrator does not see any NFS problem and the xtc is quite corrupted.

thanks.
Seb.

-- 
____________________________________________________________________

Sebastien SANTINI, PhD Student
sebastien.santini at igs.cnrs-mrs.fr
Tel:   +33 4 91 16 44 55                Fax:   +33 4 91 16 45 49
Laboratory of Structural & Genomic Information (IGS), UPR2589 - CNRS
Institute of Structural Biology & Microbiology (IBSM)
31 Chemin Joseph Aiguier, 13402 Marseille Cedex 20, FRANCE
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