[gmx-users] show extrem.pdb from g_anaeig

David spoel at xray.bmc.uu.se
Thu May 27 19:55:24 CEST 2004

On Thu, 2004-05-27 at 15:59, Q.Z. wrote:
> Dear all,
>  I would like to show the dynamic region of my protein indicated by 
> eigenvectors. Using g_anaeig with -extr, I got some extrem.pdb files. 
> Since I calculated covariance on c-alpha trace, these pdb files only 
> contain CA. What graphic programs can show them? I'll appreciate any input.
rasmol, probably pymol too.
> Q. Zou, Ph D.
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David van der Spoel, PhD, Assoc. Prof., Molecular Biophysics group,
Dept. of Cell and Molecular Biology, Uppsala University.
Husargatan 3, Box 596,  	75124 Uppsala, Sweden
phone:	46 18 471 4205		fax: 46 18 511 755
spoel at xray.bmc.uu.se	spoel at gromacs.org   http://xray.bmc.uu.se/~spoel

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