[gmx-users] Formula for opls potential in gromacs

Markus O Kaukonen mokaukon at cc.helsinki.fi
Thu Nov 11 09:17:30 CET 2004


Dear All,

How does the recommended formula for the potential energy
using gromacs with opls force field look like ?

For example is the LJ part as V_lj=4*eps*([s/r]**12-[s/r]**6)
and
RB dihedral function as 4.59 in the manual (without gamma-angle??).

Best Wishes, Markus
-- 
-----------www= http://www.iki.fi/markus.kaukonen---------------
Markus.Kaukonen at helsinki.fi   \ HOME->   Viinirinne 3 F 12
Helsinki Bioenergetics Group   \_______  02630 Espoo, Finland
Institute of Biotechnology             \ tel:+358-(0)9-5127122/h
Biocenter 3, P.O.BOX 65 (Viikinkaari 1) \____
FIN-00014 University of Helsinki              \______ H+ ______
tel: +358-(0)9-19159752/o, fax: +358-(0)9-19159920             \
--- Rikos ei kannata, eika maatalous Suomessa. (Paimio 1998) ---




More information about the gromacs.org_gmx-users mailing list