[gmx-users] NH2 angles wrong in calch.c
Charles Karney
ckarney at sarnoff.com
Tue Nov 16 23:11:07 CET 2004
The documentation of the hydrogen database (Gromacs Manual 3.2, p 94)
says that "type 3" hydrogens are added with bond angles of 120 (which is
right).
However the code, v 3.2.1, src/gmslib/calch.c, lines 182-187, uses the
tetrahedral angle 109.5 deg. Surely this is wrong.
Minor gripe: why not define the tetrahedral angle exactly?
#define alfaH (acos(-1/3.0))
--
Charles Karney Email: ckarney at sarnoff.com
Sarnoff Corporation URL: http://charles.karney.info
201 Washington Rd Phone: +1 609 734 2312
Princeton, NJ 08543-5300 Fax: +1 609 734 2323
More information about the gromacs.org_gmx-users
mailing list