[gmx-users] sas and index files

[Aswin Narain]

Hii all

If i run g_sas with an index file representing some
portion of the molecule then does the program
calculate the area of thie portion defined by the
index file as a separate entity or in the context of
the whole protein?

If it takes the portion separately and calculates the
sas (without considering the rest of the protein) then
how do i calculate the area contributed by this porion
alone to the entire molecule?

thanx
rgds
aswin

=====
 Aswin Sai Narain. S
Student
Centre for Biotechnology
Anna University
Chennai 25
Residence
20, 3rd main road
Nanganallur
Chennai 61




		
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