[gmx-users] mdp for membrane proteins

Itamar Kass ikass at cc.huji.ac.il
Thu Nov 18 19:37:19 CET 2004


Try using those files as a template, good work.

Michal Kolinski wrote:

> Dear all.
>
> I'm new with gromacs.  I plan to simulate kappa opioid receptor model in
>
> a lipid membrane.  I prepared all the necessary input files.   
> Eventually during
>
> EM I get some strange results, and it goes only for 15 -20
>
> steps.  If anyone has mdp example file for the protein-membrane system
>
> EM and MD please send me one.  Thank you in advance.      
>
> (128DPPC membrane  with GPCR)
>
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>
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