[gmx-users] (no subject)
feenstra at few.vu.nl
Mon Nov 29 18:03:10 CET 2004
SLN Prasad Reddy wrote:
> Dear Gromacs users,
> I installed gromacs 3.1 and working on a protein having 247 amino acids ,ATP and Mg++. I could generate waterbox by using genbox command. When i tried "grompp" command to get "xxx.tpr" to use with "genion" command,it is showing following error.
> calling /lib/cpp...
> sh: /lib/cpp: No such file or directory
> cpp exit code: 32512
> Tried to execute: '/lib/cpp -I/usr/local/share/gromacs/top -DFLEX_SPC nbd.top > gromppAXEl1v'
> The '/lib/cpp' command is defined in the .mdp file
The pre-processor failed. Possibly you changed something else also in your
.mdp file when changing nsteps. Are you working on an MS windows machine?
| | |
| _ _ ___,| K. Anton Feenstra |
| / \ / \'| | | Dept. of Pharmacochem. - Vrije Universiteit Amsterdam |
|( | )| | | De Boelelaan 1083 - 1081 HV Amsterdam - Netherlands |
| \_/ \_/ | | | Tel: +31 20 44 47608 - Fax: +31 20 44 47610 |
| | Feenstra at few.vu.nl - www.few.vu.nl/~feenstra/ |
| | "If You See Me Getting High, Knock Me Down" (RHCP) |
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