[gmx-users] dssp problem
Osmany Guirola Cruz
osmany.guirola at cigb.edu.cu
Tue Oct 5 15:14:58 CEST 2004
I have the same problem with my dssp.....
my dssp works with a single pdb without problems but when i do dssp i have a
similar problem ...
i have my binary in
and then do setenv DSSP /home/osmany/bin/dssp
On Wednesday 29 September 2004 09:59, smith wrote:
> This is a multipart mime message
> dear users,
> I installed the dsspcmbi.zip program in usr/local/bin/ area.unziped it and
> compiled for linux system
> *I set the path as setenv DSSP /usr/local/bin/dsspcmbi
> *The do_dssp command does not produce any result
> Select a group: 3
> Selected 3: 'C-alpha'
> There are 200 residues in your selected group
> Opening library file /usr/local/gromacs/share/top/ss.map
> trn version: GMX_trn_file (single precision)
> Reading frame 0 time 0.000
> Back Off! I just backed up ddC9pfVk to ./#ddC9pfVk.1#
> *But I dont get any output.There is no problem with storage space.
> I dont know where the problem is.
> Any suggestions/experience like this.need help
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