[gmx-users] co-solvent topologies (G53a?)
David van der Spoel
spoel at xray.bmc.uu.se
Fri Oct 22 09:01:59 CEST 2004
On Thu, 2004-10-21 at 17:50, Nuno R. L. Ferreira wrote:
> Hi
>
> Does anybody have Gromos (G53a?) .itp topology files for methanol (Walser
> et. al, JCP 2000) and DMSO (Geerke et al., JPC-B 2004)?
>
> Tryed to build those files, but I have doubts that they are ok.
I don't have a topology, but just do a 100 ps simulation with the model
to see if you can reproduce the published density and energy (this you
should do anyway...)
>
> Regards,
> Nuno
>
>
> ######################################
> Nuno Ricardo Santos Loureiro da Silva Ferreira
> Departamento de Química
> Faculdade de Ciências e Tecnologia
> Universidade de Coimbra
> 3004-535 Coimbra - Portugal
> Fax: +351 239 827703 - www.biolchem.qui.uc.pt
> ########################################
>
>
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--
David.
________________________________________________________________________
David van der Spoel, PhD, Assoc. Prof., Molecular Biophysics group,
Dept. of Cell and Molecular Biology, Uppsala University.
Husargatan 3, Box 596, 75124 Uppsala, Sweden
phone: 46 18 471 4205 fax: 46 18 511 755
spoel at xray.bmc.uu.se spoel at gromacs.org http://xray.bmc.uu.se/~spoel
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