[gmx-users] ED analysis

Ruben M Buey ruben at akilonia.cib.csic.es
Mon Sep 6 13:13:05 CEST 2004

Hi all,
Just a novice´s question about ED analysis.
What does it mean when I get a nice correlation between the projections 
onto the eigenvectors 1 and 2 of a MD trajectory?
Actually the graph has a pretty semi-circumference shape... when I look 
at the extreme projections over these eigenvectors, I can only see 
really small diferences between the structures but no domain movements 
or collective motions. How can I look at this?
Thanks in advance for your kind atention,
with bests regards,

Ruben M Buey. PhD student. Lab 308
Centro de Investigaciones Biologicas
Consejo Superior de Investigaciones Cientificas
Dpt. Protein Function and Structure
C/ Ramiro de Maeztu, 9 
28040  Madrid   (SPAIN)
Phone:   34-918373112 ext 4380
Fax:     34-915360432

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