[gmx-users] error message

Xavier Periole x.periole at chem.rug.nl
Mon Sep 13 15:36:43 CEST 2004

Maria Sabaye Moghaddam wrote:

>Hi Everyone;
>	I am getting an error message after running:
>grompp -f name.mdp -p name.top -c name.gro -o name.tpr
>processing coordinates...
>Fatal error: number of coordinates in coordinate file (name.gro, 202)
>             does not match topology (name.top, 2548)
you have to check the name.top file and include 2346 atoms that are missing
compared to the name.gro. May be the solvent ??



   Xavier Periole - Ph.D.

   Dept. of Biophysical Chemistry / MD Group 
   Univ. of Groningen
   Nijenborgh 4
   9747 AG Groningen
   The Netherlands

   Tel: +31-503634329
   Fax: +31-503634800
   email: x.periole at chem.rug.nl
   web-page: http://md.chem.rug.nl/~periole

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