[gmx-users] error message

[Xavier Periole]

Maria Sabaye Moghaddam wrote:

>Hi Everyone;
>
>	I am getting an error message after running:
>grompp -f name.mdp -p name.top -c name.gro -o name.tpr
>
>as 
>processing coordinates...
>Fatal error: number of coordinates in coordinate file (name.gro, 202)
>             does not match topology (name.top, 2548)
>  
>
you have to check the name.top file and include 2346 atoms that are missing
compared to the name.gro. May be the solvent ??

XAvier

-- 
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   Xavier Periole - Ph.D.

   Dept. of Biophysical Chemistry / MD Group 
   Univ. of Groningen
   Nijenborgh 4
   9747 AG Groningen
   The Netherlands

   Tel: +31-503634329
   Fax: +31-503634800
   email: x.periole at chem.rug.nl
   web-page: http://md.chem.rug.nl/~periole
   
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