[gmx-users] gromacs on mac osx

David van der Spoel spoel at xray.bmc.uu.se
Thu Sep 23 09:34:01 CEST 2004


On Thu, 2004-09-23 at 03:10, Choon Peng wrote:
> Hi Erik,
> 
>   I got this error when 'Make' reached:
> 
> cc -O6 -fomit-frame-pointer -finline-functions -Wall -Wno-unused
> -no-cpp-precomp -finline-limit=1000 -faltivec -funroll-all-loops -mcpu=7450
> -mtune=970 -I/usr/include/libxml2 -o grompp topio.o toppush.o topcat.o
> topshake.o convparm.o tomorse.o sorting.o splitter.o dum_parm.o readir.o
> add_par.o topexcl.o toputil.o topdirs.o grompp.o  ../mdlib/.libs/libmd.a
> -L/usr/X11R6/lib -L/usr/lib ../gmxlib/.libs/libgmx.a -L/usr/local/lib
> -L/sw/lib /usr/local/lib/libsrfftw.a /usr/local/lib/libsfftw.a -lXm
> -llanginfo -lXt -lSM -lICE -lXext -lXp -lX11 -lxml2 -lz -lpthread -liconv
> -lm
> ld: can't locate file for: -llanginfo
> 
> I can find langinfo.h in /usr/include but not liblanginfo.a in /usr/lib.
> I have installed Fink on my system but /sw/include nor /sw/lib has anything
> to do with "langinfo".

I assume you have searched your harddisk for langinfo.
Can you try
configure --without-langinfo
?
> 
> Searched the web and only found one mention of Langinfo on SourceForge but
> the info doesn't help much.
> Can't even find where I can get the library.
> 
> I'm currently running 10.3.5 with Darwin Kernel Version 7.5.0 and compiling
> with GCC 3.3 from Apple.
> 
> Thanks!
> 
> 
> Regards,
> Choon-Peng
> 
> On 9/22/04 11:40 PM, "Erik Lindahl" <lindahl at sbc.su.se> wrote:
> 
> > Hi Choon,
> > 
> > Please send me the error message when the compile fails and I'll see if
> > I can fix it.
> > 
> > Cheers,
> > 
> > Erik
> > 
> > On Sep 22, 2004, at 3:16 AM, Choon Peng wrote:
> > 
> >> Hi Eric,
> >> 
> >>   I mean try using the full path, say:
> >> /usr/local/gromacs/powerpc-apple-darwin7.0.0/bin/grompp
> >> 
> >> However, what I have on my laptop is the 3.1.5_pre1 version. Having
> >> problems
> >> compiling 3.2.1 on my PowerBook but ok on our PowerMac G5...
> >> Guess I'll have to try again.
> >> 
> >> cheers,
> >> Choon Peng
> >> 
> 
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-- 
David.
________________________________________________________________________
David van der Spoel, PhD, Assoc. Prof., Molecular Biophysics group,
Dept. of Cell and Molecular Biology, Uppsala University.
Husargatan 3, Box 596,  	75124 Uppsala, Sweden
phone:	46 18 471 4205		fax: 46 18 511 755
spoel at xray.bmc.uu.se	spoel at gromacs.org   http://xray.bmc.uu.se/~spoel
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