[gmx-users] genbox failed

Yunfeng Hu yunfeng at scripps.edu
Thu Sep 30 23:05:37 CEST 2004


Hi,  I am using the latest gromacs and compiled without errors. I am 
following John Kerrigan's tutorial for drug-enzyme complex. Gromacs 
fails at genbox no matter how small the probe is used. Here is a 
summary of the commands I use:

editconf -bt octahedron -f test.gro -o test.gro -c -d 0.5
genbox -cp test.gro -cs spc216.gro -o test_b4ion.gro -p test.top

segmentation fault in redhat linux 7.0
bus error in mac osx.3

Eric


###################################
Yunfeng Hu, Ph.D
Research Associate
Department of Molecular Biology, MB-5
The Scripps Research Institute
10550 North Torrey Pines Road
La Jolla, CA 92037
Tel. (858) 784-2204
Fax. (858) 784-2860
Emal: yunfeng at scripps.edu
Web: http://www.scripps.edu/~yunfeng
###################################




More information about the gromacs.org_gmx-users mailing list