[gmx-users] peptide attached with a linker

[purohit at iitk.ac.in]

Hi gromacs users
   I am trying to simulate a decapeptide where two pentapeptide are
connected by a short alkyl linker. how can i get the pdb file for this.
can i use the prodrug server in some way ?
thanking you in advance.


Chandra Shekhar Purohit
Ph.D student
C/O. Dr. Sandeep Verma
Dept. of Chemistry,
Indian Institute of Technology-Kanpur
Kanpur-208016
India.