[gmx-users] Box dimension-Mdrun
chandran karunakaran
ckaru2000 at yahoo.com
Mon Apr 18 12:51:17 CEST 2005
Dear GMX users,
I got the following error when I run MDRUN.
I used triclinic box type using
"editconf -bt tric -f fws.gro -f fws.gro -c -d 0.85"
If it is triclinic, should we not give three different
dimensions. But in the manual, it is not clear.
I appreciate for your help. Thanks a lot in advance
Dr.C.Karunakaran
"Warning: Only triclinic boxes with the first vector
parallel to the x-axis and t
he second vector in the xy-plane are supported.
Box (3x3):
Box[ 0]={1.#QNANe+000, 1.#QNANe+000,
1.#QNANe+000}
Box[ 1]={1.#QNANe+000, 1.#QNANe+000,
1.#QNANe+000}
Box[ 2]={1.#QNANe+000, 1.#QNANe+000,
1.#QNANe+000}
Can not fix pbc.
Fatal error: ci = -1 should be in 0 .. -1 [FILE
C:\source\gromacs-3.1.2\src\mdli
b\nsgrid.c, LINE 210]"
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