[gmx-users] pdb2gmx error.

Taeho Kim taehok at gurum.inje.ac.kr
Tue Dec 13 03:14:47 CET 2005


Hi there.

I ran program pdb2gmx to add hydrogen atom on kcsa(1BL8) ion channel with
GROMOS96(43a1) force field.

but, I have got a error message like below.

=================
WARNING: atom CZ not found in residue 95 while adding atom
-------------------------------------------------------
Program pdb2gmx, VERSION 3.3
Source code file: genhydro.c, line: 304

Fatal error:
Atom CZ not found in residue ARG95 while adding hydrogens
-------------------------------------------------------
==================

What's the meaning of error?

thanks.

Taeho.
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