[gmx-users] Zn problem

[David van der Spoel]

hnam wrote:
> In the name of Allah
> Hello everyone
>  
> I have Zn in my protein .Will  you please tell me how  I can make a new  rtp 
> 
depends on force field, but easiest is to take Zn out when you run 
pdb2gmx and add it manually to your top file and if necessary to 
ions.itp file.

> file for his  that contain ZN in it. Thank you very much for  your guide.
> Thank you very much in advance
> Institute of  Biochemistry  and  Biophysics (IBB)
> Tehran University 
> P.O.box 1417614411
> Tehran 
> Iran
> 
> 
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-- 
David.
________________________________________________________________________
David van der Spoel, PhD, Assoc. Prof., Molecular Biophysics group,
Dept. of Cell and Molecular Biology, Uppsala University.
Husargatan 3, Box 596,  	75124 Uppsala, Sweden
phone:	46 18 471 4205		fax: 46 18 511 755
spoel at xray.bmc.uu.se	spoel at gromacs.org   http://xray.bmc.uu.se/~spoel
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