[gmx-users] (no subject)

[Naser, Md Abu]

Hi David,

Gromacs verson 3.3 and system containing 10000 atoms.

Abu Naser 

School Of Life Sciences 
Heriot-Watt University 
Edinburgh EH14 4AS 
Email: mn2 at hw.ac.uk
Phone: +44(0)1314518265 
Fax : +44(0) 131 451 3009 


  




From: David van der Spoel
Sent: Thu 22/12/2005 10:30 AM
To: Discussion list for GROMACS users
Subject: Re: [gmx-users] (no subject)


Naser, Md Abu wrote:
> Hi All,
>  
> I have been using 9 workstaion to do a parallel run using PME. It scaled 
> ok but the CPU useage is only about 15%. Is there anyway I can increase 
> the CPU useage?

details please, which gromacs version, how large system.
>  
> Abu Naser
> 
> School Of Life Sciences
> Heriot-Watt University
> Edinburgh EH14 4AS
> Email: mn2 at hw.ac.uk <mailto:mn2 at hw.ac.uk>
> Phone: +44(0)1314518265
> Fax : +44(0) 131 451 3009
> 
>  
> 
> 
> ------------------------------------------------------------------------
> 
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-- 
David.
________________________________________________________________________
David van der Spoel, PhD, Assoc. Prof., Molecular Biophysics group,
Dept. of Cell and Molecular Biology, Uppsala University.
Husargatan 3, Box 596,  	75124 Uppsala, Sweden
phone:	46 18 471 4205		fax: 46 18 511 755
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