[gmx-users] PME vs. default electrostatics
Arturas
a3arzi at vaidila.vdu.lt
Thu Feb 10 15:56:38 CET 2005
Hi all,
I did two full MD for the same drug-enzyme complex: one with PME and one
without any keyword of 'coulombtype' electrostatics
(rlist,rvdw,rcoulomb=1.0).
What coulombtype GROMACS uses by default if it is not specified in
*.mdp ?
My drug stays in complex with enzyme in both MD runs, but the
fluctuation character is very different: with PME it's more chaotic,
while without PME there is more ordered structure. Why these
differences exist ?
With best
Arturas
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