[gmx-users] problem with g_mindist output

Ran Friedman ran at hemi.tau.ac.il
Thu Jan 6 22:41:34 CET 2005


Hello,

Regarding the first problem, check  
http://www.gromacs.org/pipermail/gmx-users/2004-May/010519.html

Ran.

Sandeep Somani wrote:

> Hi all
>  
> i am facing a problem which was posted on the mailing list almost a 
> year back:
>  
>> [gmx-users] g_mindist
>> Fri Dec 12 14:12:01 CET 2003
>> Dear all,
>> When I try to count the number of contacts of two groups, the output
>> file numcont.xvg always shows 0 even when i set the distance is 4nm
>> which is the same as my box. Why? What's the problem?
>> Xiaoyi
>  
> in addition i dont think the option " -o   atm-pair.out " is working 
> correctly.
>  
> could not find any helpful postings .. any updates on this would be 
> helpful ..
>  
> am using  
> :-)  VERSION 3.2.1  (-:
> thnx
> sandeep
>  
> ---
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> Computational Biology Group
> Bioinformatics Institute 
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> http://www.bii.a-star.edu.sg/~ssomani 
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-- 
------------------------------------------------------
Ran Friedman
Laser Laboratory for Fast Reactions in Biology
Department of Biochemistry
Faculty of Life Sciences
Tel-Aviv University
Tel. +972-3-6409824
Fax. +972-3-6409875
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