[gmx-users] hexagonal box
Abil Aliev
abil4616 at yahoo.co.uk
Mon Jan 17 15:49:07 CET 2005
editconf -f speptide -o out -bt tric -box 3 3 10 -angles 90 90 120
genbox -cp out -cs -p speptide -o b4em
grompp...
trjconv -f b4em.gro -o b4em2.gro -ur compact -s em -pbc inbox
vmd b4em2.gro
Michal Kolinski wrote:
> Hi all.
>
> I need to simulate a GPCR in a membrane.
>
> I wonder is there easy way to build a hexagonal box for the
>
> system. Please give me some comment on this, and thank you in advance.
>
> Michal
>
>------------------------------------------------------------------------
>
>_______________________________________________
>gmx-users mailing list
>gmx-users at gromacs.org
>http://www.gromacs.org/mailman/listinfo/gmx-users
>Please don't post (un)subscribe requests to the list. Use the
>www interface or send it to gmx-users-request at gromacs.org.
>
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://maillist.sys.kth.se/pipermail/gromacs.org_gmx-users/attachments/20050117/c9ac37c8/attachment.html>
More information about the gromacs.org_gmx-users
mailing list