[gmx-users] hexagonal box

Abil Aliev abil4616 at yahoo.co.uk
Mon Jan 17 15:49:07 CET 2005

  editconf -f speptide -o out -bt tric -box 3 3 10 -angles 90 90 120
  genbox -cp out -cs -p speptide -o b4em
  trjconv -f b4em.gro -o b4em2.gro -ur compact -s em -pbc inbox
  vmd b4em2.gro

Michal Kolinski wrote:

> Hi all.
> I need to simulate a GPCR in a membrane.
> I wonder is there  easy way to build a hexagonal box for the
> system.  Please give me some comment on this, and thank you in advance.
> Michal   
>gmx-users mailing list
>gmx-users at gromacs.org
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