[gmx-users] buried surface

David van der Spoel spoel at xray.bmc.uu.se
Mon Jan 17 20:43:34 CET 2005


On Mon, 2005-01-17 at 15:23 +0000, Osmany Guirola Cruz wrote:
> Hi people 
>  How can i calculate the buried surface of my  [gro,pdb] file 
>  can i do it with gromacs? or what program can i use ?
> 
if you can define two surface (e.g. two proteins) you can do it with
three g_sas calls.
> Thanks
> 
> Osmany 
> 
>    
>  
> 
> 
> 
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-- 
David.
________________________________________________________________________
David van der Spoel, PhD, Assoc. Prof., Molecular Biophysics group,
Dept. of Cell and Molecular Biology, Uppsala University.
Husargatan 3, Box 596,          75124 Uppsala, Sweden
phone:  46 18 471 4205          fax: 46 18 511 755
spoel at xray.bmc.uu.se    spoel at gromacs.org   http://xray.bmc.uu.se/~spoel
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