[gmx-users] trajectory not seen

Jaimin Shah jaimin at iitb.ac.in
Mon Jan 31 08:19:38 CET 2005

Dear all,

I have done an mdrun of my protein, and then I put ngmx to view the
dynamics. It shows 44 ps on clicking "animate" but it does not move on
forwarding or reversing.
Also, please tell me how do i get the coordinates of all the different
conformations of the molecule in the trajectory so that I can do docking

Thanking you in advance,

Jaimin Shah
Junior Research Fellow
Dr. Dulal Panda's Laboratory
School of Biosciences & Bioengineering
I.I.T. Bombay

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