[gmx-users] Forgotten velocities
Patrick Fuchs
Patrick.Fuchs at ebgm.jussieu.fr
Fri Jul 1 13:03:50 CEST 2005
Dear gromacs users,
I have started an md with gen_vel = no, starting from a system after
minimisation (thus by reading a gro file with the option -c in grompp).
The gro file after minimisation contains no velocities, but the system
still starts, and everything seems normal (I have checked temperature,
the different energies etc...). Can anybody tell me how the program
generates the velocities, and is there a default seed in such a case
(if yes, what's its value) ?
Thanks for your answer,
Patrick
--
_______________________________________________________
Patrick FUCHS
Equipe de Bioinformatique Genomique et Moleculaire
INSERM U726, Universite Paris 7
Case Courrier 7113
2, place Jussieu, 75251 Paris Cedex 05, FRANCE
Tel : +33 (0)1-44-27-77-16 - Fax : +33 (0)1-43-26-38-30
E-mail : Patrick.Fuchs at ebgm.jussieu.fr
Web Site: http://www.ebgm.jussieu.fr/~fuchs
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