[gmx-users] Running mpi gromacs on solaris 9
Anton Feenstra
feenstra at few.vu.nl
Thu Jun 2 11:45:43 CEST 2005
itai bloch wrote:
> Hi all,
>
> I have tried to install gromacs on solaris 9.
> I am not an expert in this so I will try to describe my problem the best...
>
> I have managed to install the double precision version.
> BUT, when I installed mpi gromacs on the same machine, I had two problems:
>
> 1. Using grompp (on 4 nodes) has given an extra error (that didn't
> occur on other mechine we used for the same system) - that the system
> is not neutral (although I added counter ions). Its a minor charge
> ("System has non-zero total charge: 2.290308e-05") but I have never
> had such thing before and also when I use dp gromcs it doesn't
> happened.
Roundoff error.
By the way, there is no such thing is grompp on 4 nodes...
--
Groetjes,
Anton
* NOTE: New Phone & Fax numbers (below) *
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| | |
| _ _ ___,| K. Anton Feenstra |
| / \ / \'| | | Dept. of Pharmacochem. - Vrije Universiteit Amsterdam |
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| \_/ \_/ | | | Tel: +31 20 59 87608 - Fax: +31 20 59 87610 |
| | Feenstra at few.vu.nl - www.few.vu.nl/~feenstra/ |
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