[gmx-users] bpsh problem

[Lianqing Zheng]

Thanks, David!

However I did copy that file to that node and I got a different error
before I did this:

mdrun_d: error while loading shared libraries: libxml2.so.2: cannot open
shared object file: No such file or directory

How to compile without this file?

Thanks,
Lianqing

On Thu, 2 Jun 2005, David wrote:

>On Thu, 2005-06-02 at 10:50 -0700, David Mobley wrote:
>> The node is missing that library, probably.
>> 
>indeed. you can also compile without it met configure option.
>
>> On 6/1/05, Lianqing Zheng <lzheng at me.rochester.edu> wrote:
>> > Dear gmx-pals,
>> > 
>> > I got the following error while trying to run a (serial) MD simulation on
>> > one of our cluster's nodes:
>> > 
>> > bpsh -n 34 mdrun_d -s t300.tpr -o t300.trr -c t300.gro -v -g t300.log
>> > 
>> > mdrun_d: error while loading shared libraries: /usr/lib/libxml2.so.2:
>> > cannot read file data: Error 28
>> > 
>> > Anyone know what it is? Thanks a lot for your help!
>> > 
>> > Lianqing Zheng
>> > 
>> > 
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>-- 
>David.
>________________________________________________________________________
>David van der Spoel, PhD, Assoc. Prof., Molecular Biophysics group,
>Dept. of Cell and Molecular Biology, Uppsala University.
>Husargatan 3, Box 596,          75124 Uppsala, Sweden
>phone:  46 18 471 4205          fax: 46 18 511 755
>spoel at xray.bmc.uu.se    spoel at gromacs.org   http://xray.bmc.uu.se/~spoel
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