[gmx-users] pbc, distance between atoms

ARGYRIOS KARATRANTOS axk47 at psu.edu
Fri Jun 3 19:38:35 CEST 2005


Hi,

1) Does anyone know with which command I can have pbc in x, y directions but no
pbc in z directions

2) I am running a polymer with 50 monomer units in water solution. Is it
possible to measure the distance of 2 atoms of polymer with respect the time of
the simulation, which command should I use
Argyris Karatrantos



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