[gmx-users] binary conversion of hessian

Michael Grabe mgrabe at itsa.ucsf.edu
Mon Jun 13 23:45:07 CEST 2005


hello,

i am new to gromacs, and if this is answered in the manuals, i  
apologize.
i am running normal mode calculations. i actually want to diagonalize  
the
hessian matrix in MATLAB but i don't know how to convert the matrix from
binary to something more readable. i see that there is gmxdump for the
trajectory files and whatnot, but what about a conversion program for  
the
hessian? moreover, if someone has a script for reading the hessian *.mtx
file into Matlab that would be even better.

thanks,
michael
------------------------------------------------------------------------ 
--------------------------
Michael Grabe, Ph.D.
HHMI/UCSF
Genetics Development & Behavioral Science Building
1550 4th Street, GD 482
San Francisco, CA 94143-0725
tel: ++ 415.476.0421
http://itsa.ucsf.edu/~mgrabe


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