[gmx-users] GROMACS on Mac OS X

[Kai Zhuang]

when i installed on my iMac G5, i did:

./configure
make
make install

for both FFTW and Gromacs.  seem to work perfectly.
make sure u get the right version of FFTW


On 6/28/05, Enrico Cattaruzza <ecattar at ts.infn.it> wrote:
> Good afternoon, I'm trying in these days to install gromacs on my
> laptop; I read on the web that you installed GROMACS on Mac OS X G4;
> I have a lot of problems with fftw, necessary for the installation of
> Gromacs; here some part of the log file
> 
> Making all in fftw
> make  all-am
> Making all in rfftw
> make[1]: Nothing to be done for `all'.
> Making all in tests
> make[1]: Nothing to be done for `all'.
> Making all in doc
> make[1]: Nothing to be done for `all'.
> Making all in threads
> make[1]: Nothing to be done for `all'.
> Making all in mpi
> make[1]: Nothing to be done for `all'.
> make[1]: Nothing to be done for `all-am'.
> 
> As far as Gromacs installation is concerned here is the log file;
> 
> Making all in contrib
> make[3]: Nothing to be done for `all'.
> make[3]: Nothing to be done for `all-am'.
> Making all in admin
> make[1]: Nothing to be done for `all'.
> Making all in scripts
> cat ./GMXRC.in | sed 's, at bindir\@,/usr/local/gromacs/powerpc-apple-
> darwin8.1.0/bin,' > GMXRC
> cat ./GMXRC.csh.in | sed 's, at libdir\@,/usr/local/gromacs/powerpc-
> apple-darwin8.1.0/lib,' | \
> sed 's, at bindir\@,/usr/local/gromacs/powerpc-apple-darwin8.1.0/bin,' | \
> sed 's, at datadir\@,/usr/local/gromacs/share,' | \
> sed 's, at mandir\@,/usr/local/gromacs/man,'  > GMXRC.csh
> cat ./GMXRC.bash.in | sed 's, at libdir\@,/usr/local/gromacs/powerpc-
> apple-darwin8.1.0/lib,' | \
> sed 's, at bindir\@,/usr/local/gromacs/powerpc-apple-darwin8.1.0/bin,' | \
> sed 's, at datadir\@,/usr/local/gromacs/share,' | \
> sed 's, at mandir\@,/usr/local/gromacs/man,'  > GMXRC.bash
> cat ./GMXRC.zsh.in | sed 's, at libdir\@,/usr/local/gromacs/powerpc-
> apple-darwin8.1.0/lib,' | \
> sed 's, at bindir\@,/usr/local/gromacs/powerpc-apple-darwin8.1.0/bin,' | \
> sed 's, at datadir\@,/usr/local/gromacs/share,' | \
> sed 's, at mandir\@,/usr/local/gromacs/man,'  > GMXRC.zsh
> Making all in share
> Making all in top
> make[2]: Nothing to be done for `all'.
> Making all in tutor
> Making all in nmr1
> make[3]: Nothing to be done for `all'.
> Making all in nmr2
> make[3]: Nothing to be done for `all'.
> Making all in speptide
> make[3]: Nothing to be done for `all'.
> Making all in water
> make[3]: Nothing to be done for `all'.
> Making all in gmxdemo
> make[3]: Nothing to be done for `all'.
> Making all in methanol
> make[3]: Nothing to be done for `all'.
> Making all in mixed
> make[3]: Nothing to be done for `all'.
> make[3]: Nothing to be done for `all-am'.
> Making all in template
> cat ./Template.mak | \
> sed 's, at LDFLAGS\@,-L/usr/local/gromacs/powerpc-apple-darwin8.1.0/
> lib  ,' | \
> sed 's, at LIBS\@,-lmd_d -lgmx_d  -L/usr/X11R6/lib -ldrfftw -ldfftw -
> lm   -lSM -lICE -lX11  -L/usr/lib -lxml2 -lz -lpthread -liconv -
> lm  ,' | \
> sed 's, at CFLAGS\@,-O6 -fomit-frame-pointer -finline-functions -Wall -
> Wno-unused -no-cpp-precomp -finline-limit=1000 -faltivec -funroll-all-
> loops -mcpu=7450 -mtune=970 -I/usr/include/libxml2   -I/usr/X11R6/
> include  -I/usr/local/gromacs/include -DDOUBLE,' | \
> sed 's, at CC\@,cc,' | \
> sed 's, at host\@,powerpc-apple-darwin8.1.0,' >Makefile.powerpc-apple-
> darwin8.1.0_double
> Making all in html
> Making all in .
> make[3]: Nothing to be done for `all-am'.
> Making all in images
> make[3]: Nothing to be done for `all'.
> Making all in online
> make[3]: Nothing to be done for `all'.
> make[2]: Nothing to be done for `all-am'.
> Making all in include
> Making all in .
> make[2]: Nothing to be done for `all-am'.
> Making all in types
> make[2]: Nothing to be done for `all'.
> Making all in man
> Making all in man1
> make[2]: Nothing to be done for `all'.
> make[2]: Nothing to be done for `all-am'.
> make[1]: Nothing to be done for `all-am'.
> 
> 
> I woul be gratefull if you can help me
> thanks
> Enrico
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-- 
Kai Zhuang
BioMedical Engineering @ University of Toronto
kai dot zhuang at gmail dot com
kai.zhuang at gmail.com
6478314789