[gmx-users] make_ndx

VISWANADHA SRIDHARA vsrid001 at odu.edu
Wed Jun 29 21:32:34 CEST 2005

Hi GMX users,

I was wondering whether there is any command in make_ndx to get the index
of the atoms(or molecules) as a function of the box vectors.
In other words, can I get the index of the molecules separately which are
1nm spherical radius(say cube's center is the sphere's center too) in a 3nm
cube as an example.

Thanks in advance,

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