[gmx-users] ffamber port and RNA

Eric J. Sorin esorin at stanford.edu
Thu Nov 3 00:20:03 CET 2005


Hi Sara,

First, do you have "cpp = /lib/cpp -traditional" in your mdp file?
Also, to anneal the solvent you can use freezegrps options to restrain the 
RNA.

Eric J. Sorin
Pande Group
Stanford University
http://folding.stanford.edu/ffamber/ 




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