[gmx-users] adding molecules - doubt

Fernando Mattio mattiofer at gmail.com
Mon Nov 7 11:25:15 CET 2005


Dear gromacs users,
I used genbox to solvate my protein, with the following command:
genbox -cp minimized_box.gro -cs spc216.gro -o minimized_water.gro -p um.top
The file spc216.gro has 256 molecules of solvent, but why I had after this
command 12060 (and not 256) molecules of water in my system??
Thank you very much in advance and best regards,
Fernando Mattio
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