[gmx-users] missing residues

Tom Joseph tom-lists at jambon.ll.cx
Thu Apr 6 23:16:44 CEST 2006


One possibility is Modloop:

http://alto.compbio.ucsf.edu/modloop/modloop.html

...which is a function of MODELLER:

http://salilab.org/modeller/

--Tom

On Apr 6, 2006, at 2:25 PM, Jayant James Jayasundar wrote:

> Hi friends!
> Part of a molecule that I am trying to simulate is not  
> crystallographically resolved. To be exact about 17 amino acids  
> from 136-148. Please suggest suggestions on how? I go about  
> building these missing residues and integrating with the  
> crystallographically resolved structure such that I can proceed  
> with MD simulations.
> Thanks
> Jayant
>
>
>
>
> Jayasundar Jayant James
> Postdoctoral research fellow,
> Department of Veterinary and Comparative Anatomy, Pharmacology and  
> Physiology(VCAPP), Washington state university, Pullman 99164-6520,  
> USA.
> http://www.chick.com/reading/tracts/0001/0001_01.asp
>
>
>
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