[gmx-users] g_dielectric error
paolo marracino
paolomarracino at hotmail.com
Tue Apr 11 11:15:01 CEST 2006
Hi, I've some problems in using the command g_dielectric in various example
of water(spc ,tip5, tip4).The error appears to be the same for each
model;this is for spc water model:
Read data set containing 2 colums and 101 rows
Assuming (from data) that timestep is 0.1, nxtail = 101
Creating standard deviation numbers ...
nbegin = 50, x[nbegin] = 5, tbegin = 5
Step chi^2 Lambda A1 A2 A3
0 7.53836e+03 1.00000e-02 0.00000e+00
1 7.53836e+03 1.00000e-01 0.00000e+00
2 7.53836e+03 1.00000e+00 0.00000e+00
3 7.53836e+03 1.00000e+01 0.00000e+00
4 7.53836e+03 1.00000e+02 0.00000e+00
5 7.53836e+03 1.00000e+03 0.00000e+00
6 7.53836e+03 1.00000e+04 0.00000e+00
7 7.53836e+03 1.00000e+05 0.00000e+00
8 7.53836e+03 1.00000e+06 0.00000e+00
9 7.53836e+03 1.00000e+07 0.00000e+00
10 7.53836e+03 1.00000e+08 0.00000e+00
11 7.53836e+03 1.00000e+09 0.00000e+00
12 7.53836e+03 1.00000e+10 0.00000e+00
13 7.53836e+03 1.00000e+11 0.00000e+00
14 7.53836e+03 1.00000e+12 0.00000e+00
15 7.53836e+03 1.00000e+13 0.00000e+00
16 7.53836e+03 1.00000e+14 0.00000e+00
17 7.53836e+03 1.00000e+15 0.00000e+00
18 7.53836e+03 1.00000e+16 0.00000e+00
19 7.53836e+03 1.00000e+17 0.00000e+00
20 7.53836e+03 1.00000e+18 0.00000e+00
21 7.53836e+03 1.00000e+19 0.00000e+00
22 7.53836e+03 1.00000e+20 0.00000e+00
23 7.53836e+03 1.00000e+21 0.00000e+00
24 7.53836e+03 1.00000e+22 0.00000e+00
25 7.53836e+03 1.00000e+23 0.00000e+00
26 7.53836e+03 1.00000e+24 0.00000e+00
27 7.53836e+03 1.00000e+25 0.00000e+00
28 7.53836e+03 1.00000e+26 0.00000e+00
29 7.53836e+03 1.00000e+27 0.00000e+00
30 7.53836e+03 1.00000e+28 0.00000e+00
31 7.53836e+03 1.00000e+29 0.00000e+00
32 7.53836e+03 1.00000e+30 0.00000e+00
33 7.53836e+03 1.00000e+31 0.00000e+00
34 7.53836e+03 1.00000e+32 0.00000e+00
35 7.53836e+03 1.00000e+33 0.00000e+00
36 7.53836e+03 1.00000e+34 0.00000e+00
37 7.53836e+03 1.00000e+35 0.00000e+00
38 7.53836e+03 1.00000e+36 0.00000e+00
39 7.53836e+03 1.00000e+37 0.00000e+00
40 7.53836e+03 1.00000e+38 0.00000e+00
41 7.53836e+03 inf 0.00000e+00
42 7.53836e+03 inf 0.00000e+00
43 7.53836e+03 inf 0.00000e+00
44 7.53836e+03 inf 0.00000e+00
45 7.53836e+03 inf 0.00000e+00
46 7.53836e+03 inf 0.00000e+00
47 7.53836e+03 inf 0.00000e+00
48 7.53836e+03 inf 0.00000e+00
49 7.53836e+03 inf 0.00000e+00
-------------------------------------------------------
Program g_dielectric, VERSION 3.3
Source code file: expfit.c, line: 465
Fatal error:
nparm = 0 in file expfit.c, line 466
-------------------------------------------------------
I tried to find out what kind of error gromacs is reproducing but in the
file expfit.c (in the directory /src/tools ) I couldn't find anything
useful and so for the file gmx_dielectric.c
Is the nparm error due to bad parmters initialization?
I tried different values for 'A' 'tau1' 'tau2' in g_dielectric but the
result is the same.
I tried different force fileds in the top file but again nothing.
Any useful tip?
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