[gmx-users] problems during make : undefined reference to `__ctype_b'

David van der Spoel spoel at xray.bmc.uu.se
Sat Apr 15 20:49:52 CEST 2006


Vanessa Oklejas wrote:
> Hi All,
> 
> I'm trying to install gromacs-3.1.4 onto a linux cluster with Red Hat v 
> 7.3.  After executing 'make' i get the following printed to the screen:
> 
> : undefined reference to `__ctype_b'
> /home/voklejas/fftw/lib/libsfftw.a(wisdom.o)(.text+0x41b): In function 
> `read_int':
> : undefined reference to `__ctype_b'
> /home/voklejas/fftw/lib/libsfftw.a(wisdom.o)(.text+0x481): In function 
> `read_int':
> : undefined reference to `__ctype_b'
> /home/voklejas/fftw/lib/libsfftw.a(wisdom.o)(.text+0x511): In function 
> `fftw_import_wisdom':
> : undefined reference to `__ctype_b'
> /home/voklejas/fftw/lib/libsfftw.a(wisdom.o)(.text+0x559): more 
> undefined references to `__ctype_b' follow
> collect2: ld returned 1 exit status
> make[3]: *** [mdrun] Error 1
> make[3]: Leaving directory `/home/voklejas/gromacs-3.1.4/src/kernel'
> make[2]: *** [all-recursive] Error 1
> make[2]: Leaving directory `/home/voklejas/gromacs-3.1.4/src'
> make[1]: *** [all] Error 2
> make[1]: Leaving directory `/home/voklejas/gromacs-3.1.4/src'
> make: *** [all-recursive] Error 1
> 
> 
> Any ideas as to what is causing this?

please use the last version. there are quite a few bugs that ave been 
fixed since 3.1.4.

> 
> Thanks,
> Vanessa
> 
> _______________________________________________
> gmx-users mailing list    gmx-users at gromacs.org
> http://www.gromacs.org/mailman/listinfo/gmx-users
> Please don't post (un)subscribe requests to the list. Use the www 
> interface or send it to gmx-users-request at gromacs.org.
> Can't post? Read http://www.gromacs.org/mailing_lists/users.php


-- 
David.
________________________________________________________________________
David van der Spoel, PhD, Assoc. Prof., Molecular Biophysics group,
Dept. of Cell and Molecular Biology, Uppsala University.
Husargatan 3, Box 596,  	75124 Uppsala, Sweden
phone:	46 18 471 4205		fax: 46 18 511 755
spoel at xray.bmc.uu.se	spoel at gromacs.org   http://folding.bmc.uu.se
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++



More information about the gromacs.org_gmx-users mailing list