[gmx-users] Problems installing gromacs in a different directory

Eduardo Martins Lopes edumlopes at yahoo.com.br
Mon Apr 17 03:03:23 CEST 2006

Greetins fellow Gromacs Users, I come to thee because when I tried to  install gromacs in a different directory without SU privileges I get  the following error (the last few log lines)
  Do I need super-user privileges ?
  oppush.Tpo"; exit 1; fi
  if cc -DHAVE_CONFIG_H -I. -I. -I../../src  -I../../include  -DGMXLIBDIR=\"/home/debora/gromacs/share/top\"  -I/home/debora/fftw/include  -O3 -fomit-frame-pointer  -finline-functions -Wall -Wno-unused -malign-double -funroll-all-loops  -MT topcat.o -MD -MP -MF ".deps/topcat.Tpo" -c -o topcat.o topcat.c; \
  then mv -f ".deps/topcat.Tpo" ".deps/topcat.Po"; else rm -f ".deps/topcat.Tpo"; exit 1; fi
  if cc -DHAVE_CONFIG_H -I. -I. -I../../src  -I../../include  -DGMXLIBDIR=\"/home/debora/gromacs/share/top\"  -I/home/debora/fftw/include  -O3 -fomit-frame-pointer  -finline-functions -Wall -Wno-unused -malign-double -funroll-all-loops  -MT topshake.o -MD -MP -MF ".deps/topshake.Tpo" -c -o topshake.o  topshake.c; \
  then mv -f ".deps/topshake.Tpo" ".deps/topshake.Po"; else rm -f ".deps/topshake.Tpo"; exit 1; fi
  make[2]: *** [all-recursive] Error 1
  make[2]: Leaving directory `/cluster/debora/gromacs-3.3.1/src'
  make[1]: *** [all] Error 2
  make[1]: Leaving directory `/cluster/debora/gromacs-3.3.1/src'
  make: *** [all-recursive] Error 1
  FFTW was installed perfectly. Am I wrong or those files inside the  /gromacs-3.3.1/src are installed in the /src directory ? I have tried  almost all combinations of fftw and gromacs and the same error is  displayed everytime...
  Thanks in advance
  Eduardo Martins Lopes
  Physics Student Universidade Federal de São Carlos - Brazil
 Yahoo! Messenger com voz - Instale agora e faça ligações de graça. 
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://maillist.sys.kth.se/pipermail/gromacs.org_gmx-users/attachments/20060416/f531b190/attachment.html>

More information about the gromacs.org_gmx-users mailing list