[gmx-users] trjcat -settime option

[Yang Ye]

Hi,

It seems that you got two questions:
1. concat several trajectory together, use trjcat.
2. use tpbconv.

To use tpbconv, just use the last trajectory you have before the 
computer failure. Also, to use tpbconv, you will need edr. I suggest you 
to use gmxcheck to check both the trr and edr file to find their common 
ending point.

Yang Ye

m-hatake at jaist.ac.jp wrote:
> Hello, again
>
> I'm sorry I had a mistake about my question.
>
>  When using tpbconv command to make a new topol.tpr and
>  continue a simulation due to some computer problems(e.g. power failure),
>  should I select _l_ option?
>  
>  When I change confout.gro into conf.gro and continue
>  a simulation, should I select _c_ option?
>
> Best Regards,
> Masa
> --
> Masaomi Hatakeyama
> Ph.D Candidate(Knowledge Science, JAIST)
> m-hatake at jaist.ac.jp
>
>
> From: m-hatake at jaist.ac.jp
> Subject: [gmx-users] trjcat -settime option
> Date: Wed, 19 Apr 2006 12:57:28 +0900 (LDT)
>
>   
>> Hi everyone,
>>
>> I'd like to ask a easy question today.
>> (I didn't understand the command explanation 
>>  because of my poor english skill)
>>
>> Please teach me the difference c(continue) and l(last)
>> when using -settime option with trjcat command.
>>
>> I have several trajectory files and want to conbine them,
>> but I have two types.
>> one of them: changing confout.gro into conf.gro and continue the simulation.
>> the other: using tpbconv command to make a new topol.tpr due to some 
>> computer problems and continue the simulation.
>>
>> When using tpbconv command to make a new topol.tpr and
>> continue a simulation due to some computer problems(e.g. power failure),
>> should I use -l option?
>>
>> When I change confout.gro into conf.gro and continue
>> a simulation, should I use -o option?
>>
>>
>> If I don't use -settime option, what happen?
>>
>> Thanks in advance,
>>
>> Masa
>> --
>> Masaomi Hatakeyama
>> Ph.D Candidate(Knowledge Science, JAIST)
>> m-hatake at jaist.ac.jp
>>
>>
>>
>>
>> _______________________________________________
>> gmx-users mailing list    gmx-users at gromacs.org
>> http://www.gromacs.org/mailman/listinfo/gmx-users
>> Please don't post (un)subscribe requests to the list. Use the 
>> www interface or send it to gmx-users-request at gromacs.org.
>> Can't post? Read http://www.gromacs.org/mailing_lists/users.php
>>
>>     
>
> _______________________________________________
> gmx-users mailing list    gmx-users at gromacs.org
> http://www.gromacs.org/mailman/listinfo/gmx-users
> Please don't post (un)subscribe requests to the list. Use the 
> www interface or send it to gmx-users-request at gromacs.org.
> Can't post? Read http://www.gromacs.org/mailing_lists/users.php
>
>