[gmx-users] g_hbond lifetime output

David van der Spoel spoel at xray.bmc.uu.se
Mon Apr 24 14:46:58 CEST 2006

Michael Torrice wrote:
> I am confused about the output from the hblife.xvg file of g_hbond.
> What exactly is the p(t) output?  Is it the percent distribution of a  
> given lifetime?  If so, I have received p(t) data that sums up to  
> anything from 0.1 toi 2.
Check my recent paper:

David van der Spoel, Paul J. van Maaren, Per Larsson and Nicusor 
Timneanu  Thermodynamics of hydrogen bonding in hydrophilic and 
hydrophobic media, J. Phys. Chem. B 110 pp. 4393-4398 (2006)

> -Michael
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David van der Spoel, PhD, Assoc. Prof., Molecular Biophysics group,
Dept. of Cell and Molecular Biology, Uppsala University.
Husargatan 3, Box 596,  	75124 Uppsala, Sweden
phone:	46 18 471 4205		fax: 46 18 511 755
spoel at xray.bmc.uu.se	spoel at gromacs.org   http://folding.bmc.uu.se

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