[gmx-users] incorporating fluorescent probes onto a protein

[jayant_jacques]

Hi friends!I have built a fluorescent probe using PRODRG and saved the coordinates without the hydrogens. 1. Must I save with hydrogens and charges?2. How to incorporate this onto cysteines. As the coordinates need to be adjusted to the location of Cys when put on the protein before I can perform any MD simulations. Is there any program that may help?? ThanksJayant James
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