[gmx-users] editconf

[Jochen Hub]

editconf -h
editconf -translate ...
cat xxx.pdb >> yyy.pdb
and remove the TER and ENDMDL lines

Good luck,
Jochen

mahbubeh zarrabi wrote:

>Dear gmx_users
>
>I am trying to insert one alpha-helical peptide . I 
>created  two pdbs, bilayer.pdb and  peptide.pdb . how
>can i were adjusted the peptide coordinates using
>editconf to be at the desired vertical 
>position in the bilayer.
>thanks
>
>
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-- 
************************************************
Jochen Hub
Max Planck Institute for Biophysical Chemistry
Computational biomolecular dynamics group
Am Fassberg 11
D-37077 Goettingen, Germany
Email: jhub[at]gwdg.de
************************************************