[gmx-users] (no subject)

[Bio]

Dear gmxns,
HOpe u r enjoying the simulation.
I have one trouble while executing a position restraint simulation to
equilibrate for 100 ps for a protein ,it takes more time..I come to know
that it is good if it takes not more than a day.......Eventhough I
strictly followed the procedure,the PR simulation takes much time...It
shows like....


Getting Loaded...
Reading file pr.tpr, VERSION 3.3.1 (single precision)
Loaded with Money
starting mdrun 'in water'
50000 steps,    100.0 ps.
step 16830, will finish at Thu Dec  7 03:51:45 2006.


Kindly suggest me what the possible ways to rectify the error.......... 

Kindly Regards,
Elavazhagan.

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  Bio
  biochid at fastmail.fm

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