[gmx-users] simulation of two peptides

[Mark Abraham]

Owen, Michael wrote:
> 
> Hello,
> 
> What are the necessary steps to set up and run a simulation of two peptides?

It'll be the same... set up your topologies (suggest one molecule in 
each of two .itp files) #include them in the .top file, pick a starting 
configuration for both of them in the same structure file, solvate, 
minimize, equilibrate, go.

Mark