[gmx-users] Re: [suggest tutorials
swamy_bioinfo at yahoo.co.in
Wed Dec 13 18:48:11 CET 2006
please suggest some tutorials to setup lipid force field or give some useful links regarding it.
Mark Abraham <Mark.Abraham at anu.edu.au> wrote:
swamy kakumani wrote:
> please give complete details how can set up lipid force field in gromacs.
No, that is what you should accomplish by reading the manual and doing
> i have downloaded lipid.itp and dmpc.itp
> please give path to setup the lipid force field.
> pdb2gmx commpnd gives only 5 force fileds. how can i increase
> forefields in that section.
You need to do your homework to determine whether any of them are
suitable, and if not, whether a suitable force field exists, and if so
whether the appropriate files are available ffor use with GROMACS.
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