[gmx-users] g_hbond

[Diego Enry]

Maybe not enough memory. Try using "-shell" .


On 12/18/06, Erik Marklund <erikm at xray.bmc.uu.se> wrote:
> On Mon, 2006-12-18 at 13:34 +0200, OZGE ENGIN wrote:
> > Hi,
> >
> > I have a problem with g_hbond. I want to investigate the H bonds formed not only within the protein but also between water molecules and the protein.In this respect,  I select the group 0 --> 'system' option for both selections, an error message like the following one appears:
> >
> > Segmentation fault
> >
> > How can I fix this problem?
>
> That's hard to say. Which version are you running?
>
> >
> > Thanks in advance
> >
> > Ozge
> >
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> /Erik
>
> --
> Erik Marklund, PhD Student, Molecular Biopcysics group,
> Dept. of Cell and Molecular Biology, Uppsala University.
> Husargatan 3, Box 596,          75124 Uppsala, Sweden
> phone: +46 18 471 4537          fax: +46 18 511 755
> erikm at xray.bmc.uu.se
>
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-- 
Diego Enry B. Gomes
Laboratório de Modelagem e Dinamica Molecular
Universidade Federal do Rio de Janeiro - Brasil.